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1

PhenoMiner: from text to a database of phenotypes associated with OMIM diseases

Collier, Nigel, Groza, Tudor, Smedley, Damian, Robinson, Peter N., Oellrich, Anika, Rebholz-Schuhmann, Dietrich

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 1.36 MB

english, 2015

2

[IEEE 2017 IEEE 30th International Symposium on Computer-Based Medical Systems (CBMS) - Thessaloniki (2017.6.22-2017.6.24)] 2017 IEEE 30th International Symposium on Computer-Based Medical Systems (CBMS) - Extracting Disease-Phenotype Relations from Text with Disease-Phenotype Concept Recognisers and Association Rule Mining

Kocbek, Simon, Groza, Tudor

Année:

2017

Langue:

english

Fichier:

PDF, 2.07 MB

english, 2017

3

From raw publications to Linked Data

Tudor Groza, Gunnar AAstrand Grimnes, Siegfried Handschuh, Stefan Decker

Journal:

Knowledge and Information Systems

Année:

2013

Langue:

english

Fichier:

PDF, 665 KB

english, 2013

4

[ACM Press the 2010 ACM Symposium - Sierre, Switzerland (2010.03.22-2010.03.26)] Proceedings of the 2010 ACM Symposium on Applied Computing - SAC '10 - Towards automatic extraction of epistemic items from scientific publications

Groza, Tudor, Handschuh, Siegfried, Bordea, Georgeta

Année:

2010

Langue:

english

Fichier:

PDF, 571 KB

english, 2010

5

[Lecture Notes in Computer Science] Knowledge Engineering and Knowledge Management Volume 10180 ||

Ciancarini, Paolo, Poggi, Francesco, Horridge, Matthew, Zhao, Jun, Groza, Tudor, Suarez-Figueroa, Mari Carmen, d'Aquin, Mathieu, Presutti, Valentina

Année:

2017

Langue:

english

Fichier:

PDF, 23.05 MB

english, 2017

6

An Abstract Framework for Modeling Argumentation in Virtual Communities

Groza, Tudor, Handschuh, Siegfried, Breslin, John G., Decker, Stefan

Journal:

International Journal of Virtual Communities and Social Networking

Année:

2009

Langue:

english

Fichier:

PDF, 1.47 MB

english, 2009

7

[IEEE 2019 Sixth International Conference on Internet of Things: Systems, Management and Security (IOTSMS) - Granada, Spain (2019.10.22-2019.10.25)] 2019 Sixth International Conference on Internet of Things: Systems, Management and Security (IOTSMS) - Secure V2V Communication with Identity-based Cryptography from License Plate Recognition

Andreica, Tudor, Groza, Bogdan

Année:

2019

Langue:

english

Fichier:

PDF, 1.21 MB

english, 2019

8

CORAAL—Dive into publications, bathe in the knowledge

Vít Nováček, Tudor Groza, Siegfried Handschuh, Stefan Decker

Journal:

Web Semantics: Science, Services and Agents on the World Wide Web

Année:

2010

Langue:

english

Fichier:

PDF, 371 KB

english, 2010

9

Supervised segmentation of phenotype descriptions for the human skeletal phenome using hybrid methods

Tudor Groza, Jane Hunter, Andreas Zankl

Journal:

BMC Bioinformatics

Année:

2012

Langue:

english

Fichier:

PDF, 227 KB

english, 2012

10

The Bone Dysplasia Ontology: integrating genotype and phenotype information in the skeletal dysplasia domain

Tudor Groza, Jane Hunter, Andreas Zankl

Journal:

BMC Bioinformatics

Année:

2012

Langue:

english

Fichier:

PDF, 507 KB

english, 2012

11

Identifying scientific artefacts in biomedical literature: The Evidence Based Medicine use case

Hassanzadeh, Hamed, Groza, Tudor, Hunter, Jane

Journal:

Journal of Biomedical Informatics

Année:

2014

Langue:

english

Fichier:

PDF, 498 KB

english, 2014

12

State of the art and open challenges in community-driven knowledge curation

Groza, Tudor, Tudorache, Tania, Dumontier, Michel

Journal:

Journal of Biomedical Informatics

Année:

2013

Langue:

english

Fichier:

PDF, 157 KB

english, 2013

13

SOUTHAMPTON.

Paul, Razan, Groza, Tudor, Hunter, Jane, Zankl, Andreas

Journal:

Année:

1866

Langue:

english

Fichier:

PDF, 401 KB

english, 1866

14

Inferring characteristic phenotypes via class association rule mining in the bone dysplasia domain

Paul, Razan, Groza, Tudor, Hunter, Jane, Zankl, Andreas

Journal:

Journal of Biomedical Informatics

Année:

2014

Langue:

english

Fichier:

PDF, 1.78 MB

english, 2014

15

Semantic interestingness measures for discovering association rules in the skeletal dysplasia domain

Paul, Razan, Groza, Tudor, Hunter, Jane, Zankl, Andreas

Journal:

Journal of Biomedical Semantics

Année:

2014

Langue:

english

Fichier:

PDF, 270 KB

english, 2014

16

[IEEE 2008 IEEE Instrumentation and Measurement Technology Conference - I2MTC 2008 - Victoria, BC, Canada (2008.05.12-2008.05.15)] 2008 IEEE Instrumentation and Measurement Technology Conference - A View on Mobile Terminal Power Efficiency of Wireless Communication

Marcu, Marius, Tudor, Dacian, Fuicu, Sebastian, Moldovan, Horatiu, Groza, Voicu

Année:

2008

Langue:

english

Fichier:

PDF, 2.06 MB

english, 2008

17

[IEEE 2009 22nd IEEE International Symposium on Computer-Based Medical Systems (CBMS) - Albuquerque, NM, USA (2009.08.2-2009.08.5)] 2009 22nd IEEE International Symposium on Computer-Based Medical Systems - Knowledge-based search for oncological literature

Novacek, Vit, Groza, Tudor, Handschuh, Siegfried

Année:

2009

Langue:

english

Fichier:

PDF, 1.03 MB

english, 2009

18

[IEEE 2013 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Shanghai, China (2013.12.18-2013.12.21)] 2013 IEEE International Conference on Bioinformatics and Biomedicine - Using silver and semi-gold standard corpora to compare open named entity recognisers

Groza, Tudor, Oellrich, Anika, Collier, Nigel

Année:

2013

Langue:

english

Fichier:

PDF, 603 KB

english, 2013

19

Toward knowledge support for analysis and interpretation of complex traits

Nigel Collier,Anika Oellrich,Tudor Groza

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 252 KB

english, 2013

20

Getting Ready for the Human Phenome Project: The 2012 Forum of the Human Variome Project

Oetting, William S., Robinson, Peter N., Greenblatt, Marc S., Cotton, Richard G., Beck, Tim, Carey, John C., Doelken, Sandra C., Girdea, Marta, Groza, Tudor, Hamilton, Carol M., Hamosh, Ada, Kerner, B

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 155 KB

english, 2013

21

Capturing domain knowledge from multiple sources: the rare bone disorders use case

Groza, Tudor, Tudorache, Tania, Robinson, Peter N, Zankl, Andreas

Journal:

Journal of Biomedical Semantics

Année:

2015

Langue:

english

Fichier:

PDF, 536 KB

english, 2015

22

Recognizing Scientific Artifacts in Biomedical Literature

Groza, Tudor, Groza, Tudor, Hassanzadeh, Hamed, Hunter, Jane

Journal:

Biomedical Informatics Insights

Année:

2013

Langue:

english

Fichier:

PDF, 980 KB

english, 2013

23

The Human Phenotype Ontology: Semantic Unification of Common and Rare Disease

Groza, Tudor, Köhler, Sebastian, Moldenhauer, Dawid, Vasilevsky, Nicole, Baynam, Gareth, Zemojtel, Tomasz, Schriml, Lynn Marie, Kibbe, Warren Alden, Schofield, Paul N., Beck, Tim, Vasant, Drashtti, Br

Journal:

The American Journal of Human Genetics

Année:

2015

Langue:

english

Fichier:

PDF, 1.85 MB

english, 2015

24

Phenotyping: Targeting genotype's rich cousin for diagnosis

Baynam, Gareth, Walters, Mark, Claes, Peter, Kung, Stefanie, LeSouef, Peter, Dawkins, Hugh, Bellgard, Matthew, Girdea, Marta, Brudno, Michael, Robinson, Peter, Zankl, Andreas, Groza, Tudor, Gillett, D

Journal:

Journal of Paediatrics and Child Health

Année:

2014

Langue:

english

Fichier:

PDF, 121 KB

english, 2014

25

[ACM Press the 2007 ACM symposium - Winnipeg, Manitoba, Canada (2007.08.28-2007.08.31)] Proceedings of the 2007 ACM symposium on Document engineering - DocEng '07 - SALT

Groza, Tudor, Schutz, Alexander, Handschuh, Siegfried

Année:

2007

Langue:

english

Fichier:

PDF, 413 KB

english, 2007

26

[ACM Press the 2007 ACM symposium - Winnipeg, Manitoba, Canada (2007.08.28-2007.08.31)] Proceedings of the 2007 ACM symposium on Document engineering - DocEng '07 - The salt triple

Groza, Tudor, Schutz, Alexander, Handschuh, Siegfried

Année:

2007

Langue:

english

Fichier:

PDF, 284 KB

english, 2007

27

Modelling expertise at different levels of granularity using semantic similarity measures in the context of collaborative knowledge-curation platforms

Ziaimatin, Hasti, Groza, Tudor, Tudorache, Tania, Hunter, Jane

Journal:

Journal of Intelligent Information Systems

Année:

2016

Langue:

english

Fichier:

PDF, 803 KB

english, 2016

28

[IEEE 2008 IEEE/WIC/ACM International Conference on Web Intelligence and Intelligent Agent Technology - Sydney, Australia (2008.12.9-2008.12.12)] 2008 IEEE/WIC/ACM International Conference on Web Intelligence and Intelligent Agent Technology - Adding Provenance and Evolution Information to Modularized Argumentation Models

Groza, Tudor, Handschuh, Siegfried, Breslin, John G.

Année:

2008

Langue:

english

Fichier:

PDF, 582 KB

english, 2008

29

Use of Model Organism and Disease Databases to Support Matchmaking for Human Disease Gene Discovery

Mungall, Christopher J., Washington, Nicole L., Nguyen-Xuan, Jeremy, Condit, Christopher, Smedley, Damian, Köhler, Sebastian, Groza, Tudor, Shefchek, Kent, Hochheiser, Harry, Robinson, Peter N., Lewis

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 1.79 MB

english, 2015

30

Special issue on bio-ontologies and phenotypes

Soldatova, Larisa N., Collier, Nigel, Oellrich, Anika, Groza, Tudor, Verspoor, Karin, Rocca-Serra, Philippe, Dumontier, Michel, Shah, Nigam H.

Journal:

Journal of Biomedical Semantics

Année:

2015

Langue:

english

Fichier:

PDF, 376 KB

english, 2015

31

Phenomics and its role in next generation sequencing

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 41 KB

english, 2016

32

Concept selection for phenotypes and diseases using learn to rank

Collier, Nigel, Oellrich, Anika, Groza, Tudor

Journal:

Journal of Biomedical Semantics

Année:

2015

Langue:

english

Fichier:

PDF, 463 KB

english, 2015

33

The digital revolution in phenotyping

Oellrich, Anika, Collier, Nigel, Groza, Tudor, Rebholz-Schuhmann, Dietrich, Shah, Nigam, Bodenreider, Olivier, Boland, Mary Regina, Georgiev, Ivo, Liu, Hongfang, Livingston, Kevin, Luna, Augustin, Mal

Journal:

Briefings in Bioinformatics

Année:

2016

Langue:

english

Fichier:

PDF, 692 KB

english, 2016

34

[Lecture Notes in Computer Science] Knowledge Engineering and Knowledge Management Volume 10180 || Swift Linked Data Miner Extension for WebProtégé

Ciancarini, Paolo, Poggi, Francesco, Horridge, Matthew, Zhao, Jun, Groza, Tudor, Suarez-Figueroa, Mari Carmen, d'Aquin, Mathieu, Presutti, Valentina

Année:

2017

Langue:

english

Fichier:

PDF, 628 KB

english, 2017

35

Harmonising phenomics information for a better interoperability in the rare disease field

Maiella, Sylvie, Olry, Annie, Hanauer, Marc, Lanneau, Valérie, Lourghi, Halima, Donadille, Bruno, Rodwell, Charlotte, Köhler, Sebastian, Seelow, Dominik, Jupp, Simon, Parkinson, Helen, Groza, Tudor, B

Journal:

European Journal of Medical Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 2.12 MB

english, 2018

36

[IEEE 6th International ICST Conference on Collaborative Computing: Networking, Applications, Worksharing - Chicago, USA (2010.10.09-2010.10.12)] Proceedings of the 6th International ICST Conference on Collaborative Computing: Networking, Applications, Worksharing - Towards Consolidated Presence

Hauswirth, Manfred, Euzenat, Jérôme, Friel, Owen, Griffin, Keith, Hession, Pat, Jennings, Brendan, Groza, Tudor, Handschuh, Siegfried, Zarko, Ivana Podnar, Polleres, Axel, Zimmermann, Antoine

Année:

2010

Langue:

english

Fichier:

PDF, 1002 KB

english, 2010

37

Generation of Silver Standard Concept Annotations from Biomedical Texts with Special Relevance to Phenotypes

Oellrich, Anika, Collier, Nigel, Smedley, Damian, Groza, Tudor, Rahman, M. Sohel

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 1.70 MB

english, 2015

38

A Supervised Approach to Quantifying Sentence Similarity: With Application to Evidence Based Medicine

Hassanzadeh, Hamed, Groza, Tudor, Nguyen, Anthony, Hunter, Jane, Smalheiser, Neil R.

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 863 KB

english, 2015

39

Scalable Predictive Analysis in Critically Ill Patients Using a Visual Open Data Analysis Platform

Poucke, Sven Van, Zhang, Zhongheng, Schmitz, Martin, Vukicevic, Milan, Laenen, Margot Vander, Celi, Leo Anthony, Deyne, Cathy De, Groza, Tudor

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 827 KB

english, 2016

40

Text mining for improved exposure assessment

Larsson, Kristin, Baker, Simon, Silins, Ilona, Guo, Yufan, Stenius, Ulla, Korhonen, Anna, Berglund, Marika, Groza, Tudor

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 2.24 MB

english, 2017

41

Semantic and Time-Dependent Expertise Profiling Models in Community-Driven Knowledge Curation Platforms

Ziaimatin, Hasti, Groza, Tudor, Hunter, Jane

Journal:

Future Internet

Année:

2013

Langue:

english

Fichier:

PDF, 1.10 MB

english, 2013

42

CogStack - experiences of deploying integrated information retrieval and extraction services in a large National Health Service Foundation Trust hospital

Jackson, Richard, Kartoglu, Ismail, Stringer, Clive, Gorrell, Genevieve, Roberts, Angus, Song, Xingyi, Wu, Honghan, Agrawal, Asha, Lui, Kenneth, Groza, Tudor, Lewsley, Damian, Northwood, Doug, Folarin

Journal:

BMC Medical Informatics and Decision Making

Année:

2018

Langue:

english

Fichier:

PDF, 1.13 MB

english, 2018

43

Knowledge Discovery from Biomedical Ontologies in Cross Domains

Shen, Feichen, Lee, Yugyung, Groza, Tudor

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 13.93 MB

english, 2016

44

Cancer Care Treatment Outcome Ontology: A Novel Computable Ontology for Profiling Treatment Outcomes in Patients With Solid Tumors

Lin, Frank P., Groza, Tudor, Kocbek, Simon, Antezana, Erick, Epstein, Richard J.

Journal:

JCO Clinical Cancer Informatics

Année:

2018

Langue:

english

Fichier:

PDF, 980 KB

english, 2018

45

Encoding Clinical Data with the Human Phenotype Ontology for Computational Differential Diagnostics

Köhler, Sebastian, Øien, N. Christine, Buske, Orion J., Groza, Tudor, Jacobsen, Julius O. B., McNamara, Craig, Vasilevsky, Nicole, Carmody, Leigh C., Gourdine, J. P., Gargano, Michael, McMurry, Julie

Journal:

Current Protocols in Human Genetics

Année:

2019

Langue:

english

Fichier:

PDF, 2.35 MB

english, 2019

46

Impacts of genomics on the health and social costs of intellectual disability

Doble, Brett, Schofield, Deborah, Evans, Carey-Anne, Groza, Tudor, Mattick, John S, Field, Mike, Roscioli, Tony

Journal:

Journal of Medical Genetics

Année:

2020

Fichier:

PDF, 287 KB

2020

47

Reference Information Extraction and Processing Using Random Conditional Fields

Groza, Tudor, Grimnes, AAstrand, Handschuh, Siegfried

Journal:

Information Technology and Libraries

Année:

2012

Fichier:

PDF, 1.63 MB

2012

48

PRESTvO: PRivacy Enabled Smartphone based access To vehicle On-board units

Groza, Bogdan, Andreica, Tudor, Berdich, Adriana, Murvay, Pal-Stefan, Gurban, Horatiu

Journal:

Année:

2020

Fichier:

PDF, 12.49 MB

2020

49

A flexible computational pipeline for research analyses of unsolved clinical exome cases

Lassmann, Timo, Francis, Richard W., Weeks, Alexia, Tang, Dave, Jamieson, Sarra E., Broley, Stephanie, Dawkins, Hugh J. S., Dreyer, Lauren, Goldblatt, Jack, Groza, Tudor, Kamien, Benjamin, Kiraly-Borr

Journal:

npj Genomic Medicine

Année:

2020

Fichier:

PDF, 996 KB

2020